RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g28630.1 View Network Show in Genome Browser |
| Other Names | Os09g0460400 |
| Description | gibberellin receptor, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 17417335-17418477 Nucleotide Length: 948 |
| Protein-coding | LOC_Os09g28630 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g50270 LOC_Os03g16920 LOC_Os09g26340 LOC_Os07g36500 LOC_Os05g39050 LOC_Os05g38740 LOC_Os04g49420 LOC_Os03g02780 LOC_Os02g45940 LOC_Os01g62230 LOC_Os01g61920 More.. |
| Downstream Genes | LOC_Os10g39410 LOC_Os09g38020 LOC_Os12g43340 LOC_Os11g47760 LOC_Os10g37670 LOC_Os09g28650 LOC_Os09g28640 LOC_Os09g28660 LOC_Os09g32220 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g28630.1 |
| Rice Genome Annotation | LOC_Os09g28630.1 |
| Ricechip | LOC_Os09g28630.1 |
| KEGG | osa:4347285 dosa:Os09t0460400-01 |
| Entrez-Gene | 4347285 |