RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g28770.1 View Network Show in Genome Browser |
| Other Names | Os09g0462400 |
| Description | patatin, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 17476731-17479576 Nucleotide Length: 1218 |
| Protein-coding | LOC_Os09g28770 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0008219 | cell death | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g55650 LOC_Os01g03820 LOC_Os06g29380 LOC_Os01g07376 LOC_Os06g09340 |
| Downstream Genes | LOC_Os11g34370 LOC_Os11g13810 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g28770.1 |
| Rice Genome Annotation | LOC_Os09g28770.1 |
| Ricechip | LOC_Os09g28770.1 |
| KEGG | osa:4347298 dosa:Os09t0462400-00 |
| Entrez-Gene | 4347298 |