RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g29080.1 View Network Show in Genome Browser |
| Other Names | Os09g0465800 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 17659697-17662227 Nucleotide Length: 546 |
| Protein-coding | LOC_Os09g29080 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g21940 LOC_Os03g38260 LOC_Os01g04730 LOC_Os05g40820 LOC_Os07g46750 LOC_Os09g24690 LOC_Os01g60790 LOC_Os08g03640 LOC_Os01g49290 LOC_Os01g51020 LOC_Os08g06040 More.. |
| Downstream Genes | LOC_Os12g05430 LOC_Os11g04070 LOC_Os12g03880 LOC_Os09g39500 LOC_Os10g32920 LOC_Os11g41610 LOC_Os11g05370 LOC_Os12g07010 LOC_Os11g06750 LOC_Os10g27174 LOC_Os11g11390 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g29080.1 |
| Rice Genome Annotation | LOC_Os09g29080.1 |
| Ricechip | LOC_Os09g29080.1 |
| KEGG | osa:4347312 dosa:Os09t0465800-01 |
| Entrez-Gene | 4347312 |