RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g29100.1 View Network Show in Genome Browser |
| Other Names | Os09g0466100 |
| Description | cyclin, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 17680696-17683508 Nucleotide Length: 1071 |
| Protein-coding | LOC_Os09g29100 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0007049 | cell cycle | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g12414 LOC_Os03g52750 LOC_Os01g27940 LOC_Os05g33040 LOC_Os04g53680 LOC_Os04g46660 LOC_Os03g10070 LOC_Os08g40170 LOC_Os03g02680 LOC_Os03g01850 LOC_Os02g05040 More.. |
| Downstream Genes | LOC_Os12g30020 LOC_Os10g41430 LOC_Os09g36440 LOC_Os12g31810 LOC_Os10g21310 |
| Reference | |
|---|---|
| PubMed | 16435118 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g29100.1 |
| Rice Genome Annotation | LOC_Os09g29100.1 |
| Ricechip | LOC_Os09g29100.1 |
| KEGG | osa:4347313 dosa:Os09t0466100-01 |
| Entrez-Gene | 4347313 |