RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g29310.1 View Network Show in Genome Browser |
| Other Names | Os09g0468300 |
| Description | zinc finger, C3HC4 type domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 17790438-17792028 Nucleotide Length: 1179 |
| Protein-coding | LOC_Os09g29310 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g34140 LOC_Os02g33680 LOC_Os05g27730 LOC_Os04g46240 LOC_Os02g43820 LOC_Os06g41770 LOC_Os05g47650 LOC_Os05g03100 LOC_Os08g01920 LOC_Os09g25760 |
| Downstream Genes | LOC_Os09g37080 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g29310.1 |
| Rice Genome Annotation | LOC_Os09g29310.1 |
| Ricechip | LOC_Os09g29310.1 |
| KEGG | osa:9269620 dosa:Os09t0468300-00 |
| Entrez-Gene | 9269620 |