RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g29404.1 View Network Show in Genome Browser |
| Other Names | Os09g0469400 |
| Description | glycogen operon protein glgX, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 17851430-17864490 Nucleotide Length: 1134 |
| Protein-coding | LOC_Os09g29404 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006091 | generation of precursor metabolites and energy | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g26234 LOC_Os06g51084 LOC_Os02g32660 LOC_Os04g33460 LOC_Os02g52710 LOC_Os04g33040 LOC_Os02g52700 LOC_Os07g43390 LOC_Os05g45720 LOC_Os07g46790 LOC_Os01g51754 More.. |
| Downstream Genes | LOC_Os10g30156 LOC_Os09g34190 LOC_Os12g15470 LOC_Os12g32970 LOC_Os11g37560 LOC_Os10g11140 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g29404.1 |
| Rice Genome Annotation | LOC_Os09g29404.1 |
| Ricechip | LOC_Os09g29404.1 |
| KEGG | osa:4347328 dosa:Os09t0469400-01 |
| Entrez-Gene | 4347328 |