RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g29840.2 View Network Show in Genome Browser |
| Other Names | Os09g0474300 |
| Description | heat shock protein, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 18150618-18155512 Nucleotide Length: 1965 |
| Protein-coding | LOC_Os09g29840 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g08360 LOC_Os02g57590 LOC_Os03g61600 LOC_Os07g20580 LOC_Os05g46290 LOC_Os02g58470 LOC_Os06g35660 LOC_Os07g12890 LOC_Os02g36710 LOC_Os04g42270 LOC_Os04g58830 More.. |
| Downstream Genes | LOC_Os10g32550 LOC_Os09g33480 LOC_Os11g37080 LOC_Os12g03822 LOC_Os11g03990 LOC_Os10g32920 LOC_Os12g13380 LOC_Os11g20790 LOC_Os11g04070 LOC_Os12g03880 LOC_Os12g38310 More.. |
| Reference | |
|---|---|
| PubMed | 19135278 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g29840.2 |
| Rice Genome Annotation | LOC_Os09g29840.2 |
| Ricechip | LOC_Os09g29840.2 |
| KEGG | osa:4347356 dosa:Os09t0474300-01 |
| Entrez-Gene | 4347356 |