RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g29970.1 View Network Show in Genome Browser |
| Other Names | Os09g0476000 |
| Description | TMV-MP30 binding protein 2C, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 18237700-18240536 Nucleotide Length: 798 |
| Protein-coding | LOC_Os09g29970 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005856 | cytoskeleton | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g04330 LOC_Os05g22260 LOC_Os08g39070 |
| Downstream Genes | LOC_Os11g38900 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g29970.1 |
| Rice Genome Annotation | LOC_Os09g29970.1 |
| Ricechip | LOC_Os09g29970.1 |
| KEGG | osa:4347362 dosa:Os09t0476000-01 |
| Entrez-Gene | 4347362 |