RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g30130.1 View Network Show in Genome Browser |
| Other Names | Os09g0478300 |
| Description | CSLE6 - cellulose synthase-like family E, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 18315154-18321214 Nucleotide Length: 2187 |
| Protein-coding | LOC_Os09g30130 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005783 | endoplasmic reticulum | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2090 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00563 rn01100 |
| Metacyc Pathways | PWY-5338 PWY-2901 PWY-2881 PWY-2902 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g30130.1 |
| Rice Genome Annotation | LOC_Os09g30130.1 |
| Ricechip | LOC_Os09g30130.1 |
| KEGG | dosa:Os09t0478300-01 |