RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g30340.1 View Network Show in Genome Browser |
| Other Names | Os09g0481200 |
| Description | photosystem I reaction center subunit, chloroplast precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 18469702-18471297 Nucleotide Length: 426 |
| Protein-coding | LOC_Os09g30340 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006091 | generation of precursor metabolites and energy | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0015979 | photosynthesis | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g33830 LOC_Os07g37240 LOC_Os08g02630 LOC_Os04g38600 LOC_Os01g31690 LOC_Os07g25430 LOC_Os03g22370 LOC_Os07g36080 LOC_Os06g15400 LOC_Os08g01380 LOC_Os03g56670 More.. |
| Downstream Genes | LOC_Os11g47970 LOC_Os11g13890 LOC_Os12g08770 LOC_Os12g02340 LOC_Os12g02310 LOC_Os11g02424 LOC_Os11g02369 LOC_Os11g02400 LOC_Os12g23200 LOC_Os12g05430 LOC_Os12g02330 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g30340.1 |
| Rice Genome Annotation | LOC_Os09g30340.1 |
| Ricechip | LOC_Os09g30340.1 |
| KEGG | osa:4347395 dosa:Os09t0481200-01 |
| Entrez-Gene | 4347395 |