RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g31260.1 View Network Show in Genome Browser |
| Other Names | Os09g0487500 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 18799238-18800124 Nucleotide Length: 354 |
| Protein-coding | LOC_Os09g31260 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g35610 LOC_Os07g12150 LOC_Os03g03770 LOC_Os08g33460 LOC_Os05g51530 LOC_Os02g04480 |
| Downstream Genes | LOC_Os12g05090 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR415 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g31260.1 |
| Rice Genome Annotation | LOC_Os09g31260.1 |
| Ricechip | LOC_Os09g31260.1 |
| KEGG | osa:4347427 dosa:Os09t0487500-01 |
| Entrez-Gene | 4347427 |