RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g31270.1 View Network Show in Genome Browser |
| Other Names | Os09g0487600 |
| Description | polygalacturonase, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 18801144-18803450 Nucleotide Length: 1374 |
| Protein-coding | LOC_Os09g31270 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g35370 LOC_Os06g35320 |
| Pathways | |
|---|---|
| Metacyc Pathways | PWY-1081 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g31270.1 |
| Rice Genome Annotation | LOC_Os09g31270.1 |
| Ricechip | LOC_Os09g31270.1 |
| KEGG | osa:4347428 dosa:Os09t0487600-01 |
| Entrez-Gene | 4347428 |