RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g31390.3 View Network Show in Genome Browser |
| Other Names | Os09g0489500 |
| Description | transcription factor, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 18868479-18874440 Nucleotide Length: 1284 |
| Protein-coding | LOC_Os09g31390 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g50310 LOC_Os06g41770 LOC_Os08g43090 LOC_Os01g64000 |
| Reference | |
|---|---|
| PubMed | 18065552 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g31390.3 |
| Rice Genome Annotation | LOC_Os09g31390.3 |
| Ricechip | LOC_Os09g31390.3 |
| KEGG | osa:4347436 dosa:Os09t0489500-02 |
| Entrez-Gene | 4347436 |