RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g31486.2 View Network Show in Genome Browser |
| Other Names | Os09g0491772 |
| Description | DnaK family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 18987942-18991156 Nucleotide Length: 1641 |
| Protein-coding | LOC_Os09g31486 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os08g25090 LOC_Os06g02620 LOC_Os09g11250 LOC_Os03g44620 LOC_Os05g48810 LOC_Os02g43930 LOC_Os04g46390 LOC_Os05g46620 LOC_Os05g06440 LOC_Os03g61730 LOC_Os08g36140 More.. |
| Downstream Genes | LOC_Os12g07060 LOC_Os09g32050 LOC_Os12g41820 LOC_Os10g42439 LOC_Os12g31840 LOC_Os12g42440 LOC_Os12g15590 LOC_Os10g36370 LOC_Os10g03610 LOC_Os11g36530 LOC_Os11g36960 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR444a-3p.1 osa-miR444d.1 |
| Reference | |
|---|---|
| PubMed | 19135278 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g31486.2 |
| Rice Genome Annotation | LOC_Os09g31486.2 |
| Ricechip | LOC_Os09g31486.2 |
| KEGG | osa:9270165 dosa:Os09t0491772-01 |
| Entrez-Gene | 9270165 |