RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g32250.1 View Network Show in Genome Browser |
| Other Names | Os09g0497700 |
| Description | DNA repair ATPase-related, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 19244915-19249815 Nucleotide Length: 1341 |
| Protein-coding | LOC_Os09g32250 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005783 | endoplasmic reticulum | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g45930 LOC_Os07g43350 LOC_Os06g01500 LOC_Os06g20370 LOC_Os01g73160 LOC_Os05g46550 LOC_Os09g12600 LOC_Os03g61010 LOC_Os02g48360 LOC_Os02g16500 LOC_Os09g26340 More.. |
| Downstream Genes | LOC_Os10g42110 LOC_Os09g34960 LOC_Os12g40900 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g32250.1 |
| Rice Genome Annotation | LOC_Os09g32250.1 |
| Ricechip | LOC_Os09g32250.1 |
| KEGG | osa:4347464 dosa:Os09t0497700-01 |
| Entrez-Gene | 4347464 |