RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g32450.1 View Network Show in Genome Browser |
| Other Names | Os09g0500600 |
| Description | DNA topoisomerase 3 protein, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 19369184-19382948 Nucleotide Length: 2601 |
| Protein-coding | LOC_Os09g32450 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006259 | DNA metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g45980 LOC_Os07g07220 LOC_Os06g44030 LOC_Os01g64720 LOC_Os01g49110 LOC_Os05g22920 LOC_Os05g04330 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g32450.1 |
| Rice Genome Annotation | LOC_Os09g32450.1 |
| Ricechip | LOC_Os09g32450.1 |
| KEGG | osa:4347482 dosa:Os09t0500600-01 |
| Entrez-Gene | 4347482 |