RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g32740.1 View Network Show in Genome Browser |
| Other Names | Os09g0505100 |
| Description | ubiquitin carboxyl-terminal hydrolase family protein, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 19522112-19527787 Nucleotide Length: 3168 |
| Protein-coding | LOC_Os09g32740 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g08200 LOC_Os06g49510 LOC_Os03g06190 LOC_Os02g03060 LOC_Os04g55480 LOC_Os09g24250 LOC_Os07g46660 LOC_Os04g37950 LOC_Os07g41090 LOC_Os02g35110 LOC_Os01g36930 More.. |
| Downstream Genes | LOC_Os10g30100 LOC_Os12g30540 LOC_Os11g36470 LOC_Os11g07280 LOC_Os11g38900 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g32740.1 |
| Rice Genome Annotation | LOC_Os09g32740.1 |
| Ricechip | LOC_Os09g32740.1 |
| KEGG | osa:4347503 dosa:Os09t0505100-01 |
| Entrez-Gene | 4347503 |