RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g32810.2 View Network Show in Genome Browser |
| Other Names | Os09g0505700 |
| Description | ribulose-phosphate 3-epimerase, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 19566172-19568924 Nucleotide Length: 645 |
| Protein-coding | LOC_Os09g32810 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os09g30100 LOC_Os06g04270 LOC_Os07g08030 LOC_Os06g02144 LOC_Os04g39270 LOC_Os08g05830 LOC_Os03g06190 LOC_Os02g16630 LOC_Os01g62870 LOC_Os07g08430 LOC_Os05g33260 More.. |
| Downstream Genes | LOC_Os09g38850 LOC_Os10g35450 LOC_Os10g06090 LOC_Os09g38840 LOC_Os09g37834 LOC_Os11g29400 LOC_Os12g16520 LOC_Os10g05400 LOC_Os09g38834 LOC_Os10g05160 LOC_Os11g47110 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5075 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g32810.2 |
| Rice Genome Annotation | LOC_Os09g32810.2 |
| Ricechip | LOC_Os09g32810.2 |
| KEGG | osa:4347508 dosa:Os09t0505700-02 |
| Entrez-Gene | 4347508 |