RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g33720.1 View Network Show in Genome Browser |
| Other Names | Os09g0512000 |
| Description | protein transport protein Sec61, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 19917485-19920309 Nucleotide Length: 1401 |
| Protein-coding | LOC_Os09g33720 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g29460 LOC_Os02g07890 LOC_Os07g42170 LOC_Os07g10660 LOC_Os07g23800 LOC_Os03g59310 LOC_Os01g67134 LOC_Os03g38260 LOC_Os03g21940 LOC_Os09g32532 LOC_Os09g32520 More.. |
| Downstream Genes | LOC_Os12g05430 LOC_Os11g41610 LOC_Os12g32380 LOC_Os11g05370 LOC_Os10g32920 LOC_Os12g07010 LOC_Os11g06750 LOC_Os09g36710 LOC_Os12g39070 LOC_Os10g27174 LOC_Os11g40140 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g33720.1 |
| Rice Genome Annotation | LOC_Os09g33720.1 |
| Ricechip | LOC_Os09g33720.1 |
| KEGG | osa:4347548 dosa:Os09t0512000-01 |
| Entrez-Gene | 4347548 |