RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g33870.1 View Network Show in Genome Browser |
| Other Names | Os09g0513700 |
| Description | RNA recognition motif containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 19997000-19999794 Nucleotide Length: 1128 |
| Protein-coding | LOC_Os09g33870 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g35950 LOC_Os08g09100 LOC_Os08g44290 LOC_Os08g02390 LOC_Os03g05830 LOC_Os03g07800 LOC_Os01g72834 LOC_Os04g53440 LOC_Os08g38410 LOC_Os01g16090 LOC_Os04g37690 More.. |
| Downstream Genes | LOC_Os11g40510 LOC_Os11g45590 LOC_Os11g41820 LOC_Os10g30370 LOC_Os10g31900 LOC_Os09g37720 LOC_Os12g04180 LOC_Os12g01010 LOC_Os11g04390 LOC_Os11g01020 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g33870.1 |
| Rice Genome Annotation | LOC_Os09g33870.1 |
| Ricechip | LOC_Os09g33870.1 |
| KEGG | osa:4347560 dosa:Os09t0513700-01 |
| Entrez-Gene | 4347560 |