RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g34100.1 View Network Show in Genome Browser |
| Other Names | Os09g0516600 |
| Description | metallo-beta-lactamase family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 20122339-20127417 Nucleotide Length: 1011 |
| Protein-coding | LOC_Os09g34100 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g63590 LOC_Os09g19920 LOC_Os02g58270 LOC_Os01g13150 LOC_Os09g23380 LOC_Os02g58260 LOC_Os06g09830 LOC_Os08g35480 LOC_Os06g09820 LOC_Os02g10720 LOC_Os02g10710 More.. |
| Downstream Genes | LOC_Os09g39590 LOC_Os11g34570 LOC_Os10g26720 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00620 |
| Metacyc Pathways | PWY-5386 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g34100.1 |
| Rice Genome Annotation | LOC_Os09g34100.1 |
| Ricechip | LOC_Os09g34100.1 |
| KEGG | osa:4347581 dosa:Os09t0516600-01 |
| Entrez-Gene | 4347581 |