RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g34140.1 View Network Show in Genome Browser |
| Other Names | Os09g0517000 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 20156393-20158256 Nucleotide Length: 363 |
| Protein-coding | LOC_Os09g34140 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g14040 LOC_Os05g01950 LOC_Os09g26810 LOC_Os01g68480 LOC_Os07g30670 LOC_Os05g33280 LOC_Os09g10750 LOC_Os06g08670 LOC_Os03g21560 LOC_Os02g51470 LOC_Os03g03020 More.. |
| Downstream Genes | LOC_Os12g29760 LOC_Os11g27329 LOC_Os11g27264 LOC_Os10g01110 LOC_Os12g08770 LOC_Os12g23200 LOC_Os11g42390 LOC_Os10g32400 LOC_Os10g32348 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5809 osa-miR2102-5p |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g34140.1 |
| Rice Genome Annotation | LOC_Os09g34140.1 |
| Ricechip | LOC_Os09g34140.1 |
| KEGG | osa:4347585 dosa:Os09t0517000-01 |
| Entrez-Gene | 4347585 |