RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g34180.1 View Network Show in Genome Browser |
| Other Names | Os09g0517600 |
| Description | formin, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 20179714-20183035 Nucleotide Length: 2367 |
| Protein-coding | LOC_Os09g34180 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g51600 LOC_Os07g38730 LOC_Os03g58890 LOC_Os03g07000 LOC_Os02g58070 LOC_Os07g09630 LOC_Os03g58880 LOC_Os05g41010 LOC_Os07g14340 LOC_Os06g10870 LOC_Os03g06350 More.. |
| Downstream Genes | LOC_Os11g14220 LOC_Os10g31420 LOC_Os12g29760 LOC_Os10g35470 LOC_Os10g27340 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g34180.1 |
| Rice Genome Annotation | LOC_Os09g34180.1 |
| Ricechip | LOC_Os09g34180.1 |
| KEGG | osa:4347588 dosa:Os09t0517600-01 |
| Entrez-Gene | 4347588 |