RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g35000.1 View Network Show in Genome Browser |
| Other Names | Os09g0521900 |
| Description | flap endonuclease, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 20389919-20394140 Nucleotide Length: 1890 |
| Protein-coding | LOC_Os09g35000 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006259 | DNA metabolic process | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0004518 | nuclease activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g15033 LOC_Os03g12610 LOC_Os03g17930 LOC_Os06g14080 LOC_Os08g40820 LOC_Os01g25880 LOC_Os09g28890 LOC_Os02g27760 LOC_Os07g10720 LOC_Os05g05860 LOC_Os08g21330 More.. |
| Downstream Genes | LOC_Os11g38959 LOC_Os10g28640 LOC_Os11g06750 LOC_Os12g07010 LOC_Os11g11390 LOC_Os11g08940 LOC_Os11g29190 LOC_Os12g21798 LOC_Os09g36710 LOC_Os10g29660 LOC_Os11g40140 More.. |
| Reference | |
|---|---|
| PubMed | 15792960 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g35000.1 |
| Rice Genome Annotation | LOC_Os09g35000.1 |
| Ricechip | LOC_Os09g35000.1 |
| KEGG | osa:4347617 dosa:Os09t0521900-01 |
| Entrez-Gene | 4347617 |