RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g35730.1 View Network Show in Genome Browser |
| Other Names | Os09g0525900 |
| Description | OsRhmbd16 - Putative Rhomboid homologue, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 20549805-20553307 Nucleotide Length: 972 |
| Protein-coding | LOC_Os09g35730 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g55740 LOC_Os01g18100 LOC_Os01g67040 LOC_Os09g17620 LOC_Os03g61760 LOC_Os06g03540 LOC_Os03g41080 LOC_Os06g24540 LOC_Os03g31490 LOC_Os06g03560 LOC_Os09g15340 More.. |
| Downstream Genes | LOC_Os10g35180 LOC_Os12g02350 LOC_Os12g38860 LOC_Os09g39560 LOC_Os10g33650 LOC_Os12g32970 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g35730.1 |
| Rice Genome Annotation | LOC_Os09g35730.1 |
| Ricechip | LOC_Os09g35730.1 |
| KEGG | osa:4347634 dosa:Os09t0525900-01 |
| Entrez-Gene | 4347634 |