RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g35760.1 View Network Show in Genome Browser |
| Other Names | Os09g0526300,Os09g0526200 |
| Description | homeobox and START domains containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 20567982-20574325 Nucleotide Length: 2619 |
| Protein-coding | LOC_Os09g35760 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009653 | anatomical structure morphogenesis | Biological Process | IEA | |
| GO:0009653 | anatomical structure morphogenesis | Biological Process | IEA | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0030154 | cell differentiation | Biological Process | IEA | |
| GO:0030154 | cell differentiation | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0009605 | response to external stimulus | Biological Process | IEA | |
| GO:0009605 | response to external stimulus | Biological Process | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g08034 LOC_Os09g13630 LOC_Os02g38020 LOC_Os03g10210 LOC_Os01g53450 LOC_Os07g03770 LOC_Os05g03884 LOC_Os02g08544 LOC_Os02g47150 LOC_Os09g34230 LOC_Os08g38160 More.. |
| Downstream Genes | LOC_Os12g03960 LOC_Os10g41150 LOC_Os10g18530 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g35760.1 |
| Rice Genome Annotation | LOC_Os09g35760.1 |
| Ricechip | LOC_Os09g35760.1 |
| KEGG | osa:4347636 osa:4347635 dosa:Os09t0526300-00dosa:Os09t0526200-01 |
| Entrez-Gene | 4347636 |