RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os09g35800.1 View Network Show in Genome Browser
Other Names	Os09g0526700
Description	UDP-glucose 4-epimerase, putative, expressed
Gene Attributes	Chromosome: Chr9 CDS Coordinates (5'-3'): 20600604-20603003 Nucleotide Length: 1122
Protein-coding	LOC_Os09g35800

Gene Ontology Classification
GO	Name	Type	Code
GO:0009058	biosynthetic process	Biological Process	IEA
GO:0005975	carbohydrate metabolic process	Biological Process	IEA
GO:0009987	cellular process	Biological Process	IEA
GO:0008152	metabolic process	Biological Process	IEA
GO:0006950	response to stress	Biological Process	IEA
GO:0003824	catalytic activity	Molecular Function	IEA
GO:0005515	protein binding	Molecular Function	IEA
GO:0005829	cytosol	Cellular Component	IEA
GO:0005886	plasma membrane	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os03g61710 LOC_Os02g53400 LOC_Os04g51880 LOC_Os01g70400 LOC_Os02g57990 LOC_Os06g25439 LOC_Os02g57180 LOC_Os03g07140 LOC_Os02g04840 LOC_Os06g48940 LOC_Os06g44270 More..
Downstream Genes	LOC_Os11g44810 LOC_Os10g40580 LOC_Os11g26890 LOC_Os09g39410 LOC_Os10g35670 LOC_Os10g06720 LOC_Os12g01449 LOC_Os11g01439 LOC_Os11g05170 LOC_Os10g01044 LOC_Os11g07930 More..

miRNA Regulations
miRNAs	osa-miR5809

Pathways
KEGG Pathways	rn00052 rn00520 rn01100 rn01110
Metacyc Pathways	PWY-2582 DTDPRHAMSYN-PWY PWY-3821 P61-PWY GALACTMETAB-PWY

Database Links
Gramene	LOC_Os09g35800.1
Rice Genome Annotation	LOC_Os09g35800.1
Ricechip	LOC_Os09g35800.1
KEGG	osa:4347638 dosa:Os09t0526700-01
Entrez-Gene	4347638