RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g35920.1 View Network Show in Genome Browser |
| Other Names | Os09g0528300 |
| Description | mediator of RNA polymerase II transcription subunit 10, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 20673831-20678640 Nucleotide Length: 573 |
| Protein-coding | LOC_Os09g35920 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g11370 LOC_Os04g56640 LOC_Os07g07020 LOC_Os09g26180 LOC_Os03g05730 LOC_Os08g13930 LOC_Os01g62840 LOC_Os03g16150 LOC_Os05g05860 LOC_Os09g32680 LOC_Os02g02510 More.. |
| Downstream Genes | LOC_Os10g41450 LOC_Os10g42950 LOC_Os10g30580 LOC_Os11g08940 LOC_Os12g37370 LOC_Os12g38000 LOC_Os10g27190 LOC_Os10g27230 LOC_Os11g06750 LOC_Os12g07010 LOC_Os11g38670 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2863c |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g35920.1 |
| Rice Genome Annotation | LOC_Os09g35920.1 |
| Ricechip | LOC_Os09g35920.1 |
| KEGG | osa:4347648 dosa:Os09t0528300-01 |
| Entrez-Gene | 4347648 |