RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g36240.1 View Network Show in Genome Browser |
| Other Names | Os09g0532700 |
| Description | deoxyribodipyrimidine photolyase family protein, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 20897579-20903515 Nucleotide Length: 2088 |
| Protein-coding | LOC_Os09g36240 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006259 | DNA metabolic process | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g19760 LOC_Os02g41550 LOC_Os05g33520 LOC_Os07g28790 LOC_Os01g67120 LOC_Os02g56200 LOC_Os01g34480 LOC_Os03g08070 LOC_Os02g06300 LOC_Os09g25150 LOC_Os08g34280 More.. |
| Downstream Genes | LOC_Os10g08580 LOC_Os10g35940 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5147 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g36240.1 |
| Rice Genome Annotation | LOC_Os09g36240.1 |
| Ricechip | LOC_Os09g36240.1 |
| KEGG | osa:4347677 dosa:Os09t0532700-01 |
| Entrez-Gene | 4347677 |