RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g36270.1 View Network Show in Genome Browser |
| Other Names | Os09g0533100 |
| Description | pantothenate kinase, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 20928402-20936421 Nucleotide Length: 2715 |
| Protein-coding | LOC_Os09g36270 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g09460 LOC_Os05g09500 LOC_Os05g45590 LOC_Os01g53930 LOC_Os05g44760 LOC_Os07g26540 LOC_Os01g52450 LOC_Os02g53420 LOC_Os07g09890 LOC_Os03g02260 LOC_Os01g71320 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5541 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00770 rn01100 |
| Metacyc Pathways | COA-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g36270.1 |
| Rice Genome Annotation | LOC_Os09g36270.1 |
| Ricechip | LOC_Os09g36270.1 |
| KEGG | osa:4347680 dosa:Os09t0533100-01 |
| Entrez-Gene | 4347680 |