RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os09g36300.3 View Network Show in Genome Browser
Other Names	Os09g0533400
Description	OsLonP4 - Putative Lon protease homologue, expressed
Gene Attributes	Chromosome: Chr9 CDS Coordinates (5'-3'): 20945915-20952936 Nucleotide Length: 2481
Protein-coding	LOC_Os09g36300

Gene Ontology Classification
GO	Name	Type	Code
GO:0009056	catabolic process	Biological Process	IEA
GO:0016043	cellular component organization	Biological Process	IEA
GO:0009987	cellular process	Biological Process	IEA
GO:0040007	growth	Biological Process	IEA
GO:0008152	metabolic process	Biological Process	IEA
GO:0006139	nucleobase, nucleoside, nucleotide and nucleic acid metabolic process	Biological Process	IEA
GO:0009791	post-embryonic development	Biological Process	IEA
GO:0019538	protein metabolic process	Biological Process	IEA
GO:0006810	transport	Biological Process	IEA
GO:0003677	DNA binding	Molecular Function	IEA
GO:0016787	hydrolase activity	Molecular Function	IEA
GO:0000166	nucleotide binding	Molecular Function	IEA
GO:0005575	cellular_component	Cellular Component	IEA
GO:0005622	intracellular	Cellular Component	IEA
GO:0005777	peroxisome	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os01g66330 LOC_Os05g45750 LOC_Os02g19150 LOC_Os02g35630 LOC_Os04g44400 LOC_Os02g42290 LOC_Os03g19510 LOC_Os01g32350 LOC_Os01g16530 LOC_Os06g20320 LOC_Os03g22430 More..
Downstream Genes	LOC_Os10g43050 LOC_Os10g21300 LOC_Os12g10590 LOC_Os10g31864 LOC_Os12g37690

miRNA Regulations
miRNAs	osa-miR414

Database Links
Gramene	LOC_Os09g36300.3
Rice Genome Annotation	LOC_Os09g36300.3
Ricechip	LOC_Os09g36300.3
KEGG	osa:4347683 dosa:Os09t0533400-01
Entrez-Gene	4347683