RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g36370.1 View Network Show in Genome Browser |
| Other Names | Os09g0534200 |
| Description | ER lumen protein retaining receptor containing protein, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 20988450-20994466 Nucleotide Length: 1599 |
| Protein-coding | LOC_Os09g36370 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0004872 | receptor activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g25640 LOC_Os01g43750 LOC_Os01g43760 LOC_Os01g41810 LOC_Os01g29150 LOC_Os06g39880 LOC_Os01g43700 LOC_Os08g43440 LOC_Os03g40600 LOC_Os01g43851 LOC_Os01g41820 More.. |
| Downstream Genes | LOC_Os10g26340 LOC_Os11g27730 LOC_Os10g36848 LOC_Os12g02630 LOC_Os10g30380 LOC_Os11g04710 LOC_Os10g30410 LOC_Os12g44290 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g36370.1 |
| Rice Genome Annotation | LOC_Os09g36370.1 |
| Ricechip | LOC_Os09g36370.1 |
| KEGG | osa:4347687 dosa:Os09t0534200-00 |
| Entrez-Gene | 4347687 |