RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
General Information | |
---|---|
Locus Name | LOC_Os09g36450.1 View Network Show in Genome Browser |
Other Names | Os09g0535000 |
Description | triosephosphate isomerase, chloroplast precursor, putative, expressed |
Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 21033055-21036507 Nucleotide Length: 915 |
Protein-coding | LOC_Os09g36450 |
Gene Ontology Classification | ||||
---|---|---|---|---|
GO | Name | Type | Code | |
GO:0009058 | biosynthetic process | Biological Process | IEA | |
GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
GO:0009056 | catabolic process | Biological Process | IEA | |
GO:0016043 | cellular component organization | Biological Process | IEA | |
GO:0009987 | cellular process | Biological Process | IEA | |
GO:0006629 | lipid metabolic | Biological Process | IEA | |
GO:0007275 | multicellular organismal development | Biological Process | IEA | |
GO:0015979 | photosynthesis | Biological Process | IEA | |
GO:0000003 | reproduction | Biological Process | IEA | |
GO:0003824 | catalytic activity | Molecular Function | IEA | |
GO:0005515 | protein binding | Molecular Function | IEA | |
GO:0005829 | cytosol | Cellular Component | IEA | |
GO:0005576 | extracellular region | Cellular Component | IEA | |
GO:0005739 | mitochondrion | Cellular Component | IEA | |
GO:0009536 | plastid | Cellular Component | IEA | |
GO:0009579 | thylakoid | Cellular Component | IEA |
Regulatory Genes ( Show Network In Viewer ) | |
---|---|
Upstream Genes | LOC_Os06g45710 LOC_Os01g58610 LOC_Os02g07260 LOC_Os05g41640 LOC_Os04g38600 LOC_Os03g03720 LOC_Os04g40950 LOC_Os02g38920 LOC_Os02g07490 LOC_Os08g03290 LOC_Os06g45590 More.. |
Downstream Genes | LOC_Os10g30550 LOC_Os12g34010 LOC_Os10g08550 LOC_Os10g30580 LOC_Os12g14939 LOC_Os10g37500 LOC_Os10g36860 LOC_Os12g23180 LOC_Os11g06390 LOC_Os10g36650 LOC_Os10g26570 More.. |
Pathways | |
---|---|
KEGG Pathways | rn00010 rn00051 rn00562 rn00710 rn01100 rn01110 rn01120 |
Metacyc Pathways | ANAEROFRUCAT-PWY PWY-1042 CALVIN-PWY PWY-3801 GLYCOLYSIS |
Database Links | |
---|---|
Gramene | LOC_Os09g36450.1 |
Rice Genome Annotation | LOC_Os09g36450.1 |
Ricechip | LOC_Os09g36450.1 |
KEGG | osa:4347691 dosa:Os09t0535000-02 |
Entrez-Gene | 4347691 |