RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g36560.1 View Network Show in Genome Browser |
| Other Names | Os09g0536300 |
| Description | thaumatin, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 21088846-21090582 Nucleotide Length: 993 |
| Protein-coding | LOC_Os09g36560 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os07g14070 LOC_Os07g14030 LOC_Os07g03730 LOC_Os02g27300 LOC_Os01g28450 LOC_Os07g03710 LOC_Os07g03690 LOC_Os07g03740 LOC_Os04g52280 LOC_Os01g28500 LOC_Os07g03458 More.. |
| Downstream Genes | LOC_Os10g29470 LOC_Os10g11500 LOC_Os12g01370 LOC_Os12g18110 LOC_Os11g01340 LOC_Os10g11810 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2925 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g36560.1 |
| Rice Genome Annotation | LOC_Os09g36560.1 |
| Ricechip | LOC_Os09g36560.1 |
| KEGG | osa:4347699 dosa:Os09t0536300-00 |
| Entrez-Gene | 4347699 |