RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g36670.1 View Network Show in Genome Browser |
| Other Names | Os09g0537600 |
| Description | peptidyl-prolyl cis-trans isomerase, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 21151736-21154358 Nucleotide Length: 648 |
| Protein-coding | LOC_Os09g36670 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005794 | Golgi apparatus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os08g29370 LOC_Os07g37830 LOC_Os03g01090 LOC_Os08g06470 LOC_Os02g58730 LOC_Os04g20810 LOC_Os03g64030 LOC_Os02g35640 LOC_Os03g52780 LOC_Os01g67040 LOC_Os08g29669 More.. |
| Downstream Genes | LOC_Os11g38990 LOC_Os10g06630 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5518 osa-miR156f-3p osa-miR156h-3p osa-miR156l-3p |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g36670.1 |
| Rice Genome Annotation | LOC_Os09g36670.1 |
| Ricechip | LOC_Os09g36670.1 |
| KEGG | osa:4347707 dosa:Os09t0537600-01 |
| Entrez-Gene | 4347707 |