RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g37020.1 View Network Show in Genome Browser |
| Other Names | Os09g0542200 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 21354802-21357854 Nucleotide Length: 729 |
| Protein-coding | LOC_Os09g37020 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g12220 LOC_Os01g53240 LOC_Os05g02060 LOC_Os05g49170 LOC_Os01g72950 LOC_Os06g42850 LOC_Os02g48560 LOC_Os02g51290 LOC_Os07g40620 LOC_Os04g52390 LOC_Os04g58620 More.. |
| Downstream Genes | LOC_Os12g37650 LOC_Os12g24580 LOC_Os11g47730 LOC_Os10g22590 LOC_Os10g35180 LOC_Os10g30290 LOC_Os11g05390 LOC_Os12g10510 LOC_Os12g02120 LOC_Os11g02180 LOC_Os12g32970 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1436 osa-miR818a osa-miR818b osa-miR818c osa-miR818d osa-miR818e |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g37020.1 |
| Rice Genome Annotation | LOC_Os09g37020.1 |
| Ricechip | LOC_Os09g37020.1 |
| KEGG | osa:4347738 dosa:Os09t0542200-01 |
| Entrez-Gene | 4347738 |