RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g37270.1 View Network Show in Genome Browser |
| Other Names | Os09g0544800 |
| Description | ATROPGEF7/ROPGEF7, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 21525950-21529866 Nucleotide Length: 1686 |
| Protein-coding | LOC_Os09g37270 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009653 | anatomical structure morphogenesis | Biological Process | IEA | |
| GO:0030154 | cell differentiation | Biological Process | IEA | |
| GO:0016049 | cell growth | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0009856 | pollination | Biological Process | IEA | |
| GO:0030234 | enzyme regulator activity | Molecular Function | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g58730 LOC_Os06g20370 LOC_Os05g45930 LOC_Os03g19520 LOC_Os08g40820 LOC_Os06g48650 |
| Downstream Genes | LOC_Os10g35450 LOC_Os11g44810 LOC_Os12g01916 LOC_Os09g37700 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g37270.1 |
| Rice Genome Annotation | LOC_Os09g37270.1 |
| Ricechip | LOC_Os09g37270.1 |
| KEGG | osa:4347751 dosa:Os09t0544800-01 |
| Entrez-Gene | 4347751 |