RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g37600.1 View Network Show in Genome Browser |
| Other Names | Os09g0548200 |
| Description | lysM domain-containing GPI-anchored protein precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 21677478-21680309 Nucleotide Length: 1122 |
| Protein-coding | LOC_Os09g37600 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g71400 LOC_Os06g05520 LOC_Os03g49250 LOC_Os01g53840 LOC_Os03g30790 LOC_Os03g51430 LOC_Os03g57310 LOC_Os01g71340 LOC_Os03g58580 LOC_Os08g42580 LOC_Os02g36940 More.. |
| Downstream Genes | LOC_Os10g34420 LOC_Os10g02970 LOC_Os10g38930 LOC_Os11g40690 LOC_Os12g32850 LOC_Os11g09010 LOC_Os11g31980 LOC_Os10g11810 LOC_Os10g30540 LOC_Os11g37920 LOC_Os12g08180 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g37600.1 |
| Rice Genome Annotation | LOC_Os09g37600.1 |
| Ricechip | LOC_Os09g37600.1 |
| KEGG | osa:4347773 dosa:Os09t0548200-01 |
| Entrez-Gene | 4347773 |