RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g37930.1 View Network Show in Genome Browser |
| Other Names | Os09g0551900 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 21868860-21878587 Nucleotide Length: 3690 |
| Protein-coding | LOC_Os09g37930 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0007049 | cell cycle | Biological Process | IEA | |
| GO:0006259 | DNA metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g51350 LOC_Os01g73760 LOC_Os07g11050 LOC_Os01g72880 LOC_Os03g59570 LOC_Os05g24660 LOC_Os01g49390 LOC_Os03g24240 LOC_Os03g24440 LOC_Os09g24220 LOC_Os04g58630 More.. |
| Downstream Genes | LOC_Os11g48090 LOC_Os11g38020 LOC_Os11g17610 LOC_Os10g37490 LOC_Os12g21890 LOC_Os11g38030 LOC_Os10g34420 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g37930.1 |
| Rice Genome Annotation | LOC_Os09g37930.1 |
| Ricechip | LOC_Os09g37930.1 |
| KEGG | osa:4347792 dosa:Os09t0551900-01 |
| Entrez-Gene | 4347792 |