RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g38030.2 View Network Show in Genome Browser |
| Other Names | Os09g0553200 |
| Description | UTP--glucose-1-phosphate uridylyltransferase, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 21917319-21922423 Nucleotide Length: 1329 |
| Protein-coding | LOC_Os09g38030 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g09460 LOC_Os08g42730 LOC_Os05g09500 LOC_Os01g74000 LOC_Os08g10600 LOC_Os02g36960 LOC_Os05g45590 LOC_Os09g30150 LOC_Os06g18830 LOC_Os04g52370 LOC_Os01g53930 More.. |
| Downstream Genes | LOC_Os10g11140 LOC_Os11g33240 LOC_Os11g08300 LOC_Os12g41220 LOC_Os10g37660 LOC_Os11g47760 LOC_Os12g04010 LOC_Os11g04200 LOC_Os12g43740 LOC_Os12g01160 LOC_Os11g01154 More.. |
| Reference | |
|---|---|
| PubMed | 17400897 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g38030.2 |
| Rice Genome Annotation | LOC_Os09g38030.2 |
| Ricechip | LOC_Os09g38030.2 |
| KEGG | osa:4347800 dosa:Os09t0553200-01 |
| Entrez-Gene | 4347800 |