RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g38060.2 View Network Show in Genome Browser |
| Other Names | Os09g0553600 |
| Description | nicotinate-nucleotide pyrophosphorylase, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 21930991-21934963 Nucleotide Length: 1116 |
| Protein-coding | LOC_Os09g38060 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g04170 LOC_Os02g30180 LOC_Os04g35060 LOC_Os03g62110 LOC_Os01g25880 LOC_Os08g41500 LOC_Os05g06350 LOC_Os01g14950 LOC_Os01g24060 LOC_Os05g28510 LOC_Os03g18350 More.. |
| Downstream Genes | LOC_Os12g19304 LOC_Os12g38110 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2925 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g38060.2 |
| Rice Genome Annotation | LOC_Os09g38060.2 |
| Ricechip | LOC_Os09g38060.2 |
| KEGG | osa:4347802 dosa:Os09t0553600-01 |
| Entrez-Gene | 4347802 |