RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g38530.1 View Network Show in Genome Browser |
| Other Names | Os09g0557800 |
| Description | transmembrane 9 superfamily member, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 22168446-22172434 Nucleotide Length: 1941 |
| Protein-coding | LOC_Os09g38530 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| GO:0005794 | Golgi apparatus | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g28750 LOC_Os01g19840 LOC_Os01g40660 LOC_Os07g10830 LOC_Os03g08624 LOC_Os05g44360 LOC_Os01g68324 LOC_Os03g45170 LOC_Os02g02410 LOC_Os04g51630 LOC_Os03g14990 More.. |
| Downstream Genes | LOC_Os10g30090 LOC_Os12g38000 LOC_Os11g09280 LOC_Os12g42850 LOC_Os11g20790 LOC_Os12g15590 LOC_Os11g31640 LOC_Os11g48090 LOC_Os11g05730 LOC_Os10g26050 LOC_Os11g34350 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g38530.1 |
| Rice Genome Annotation | LOC_Os09g38530.1 |
| Ricechip | LOC_Os09g38530.1 |
| KEGG | osa:4347829 dosa:Os09t0557800-01 |
| Entrez-Gene | 4347829 |