RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g38550.1 View Network Show in Genome Browser |
| Other Names | Os09g0558000 |
| Description | protein phosphatase 2C, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 22173732-22178361 Nucleotide Length: 1089 |
| Protein-coding | LOC_Os09g38550 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g05630 LOC_Os01g32660 LOC_Os05g04460 LOC_Os01g47470 LOC_Os06g49170 LOC_Os04g03830 LOC_Os08g04420 LOC_Os03g57450 LOC_Os04g12580 LOC_Os06g48300 LOC_Os04g30040 More.. |
| Downstream Genes | LOC_Os12g07590 LOC_Os10g09550 LOC_Os12g01740 LOC_Os10g20120 LOC_Os11g01740 LOC_Os09g38800 LOC_Os10g35450 LOC_Os10g02720 LOC_Os12g29434 LOC_Os12g02810 LOC_Os10g05250 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g38550.1 |
| Rice Genome Annotation | LOC_Os09g38550.1 |
| Ricechip | LOC_Os09g38550.1 |
| KEGG | osa:4347831 dosa:Os09t0558000-01 |
| Entrez-Gene | 4347831 |