RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g38980.2 View Network Show in Genome Browser |
| Other Names | Os09g0563300 |
| Description | T-complex protein, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 22382924-22387028 Nucleotide Length: 1074 |
| Protein-coding | LOC_Os09g38980 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os09g26730 LOC_Os07g44740 LOC_Os02g54060 LOC_Os06g09679 LOC_Os06g09688 LOC_Os03g25050 LOC_Os09g24670 LOC_Os01g19140 |
| Downstream Genes | LOC_Os10g41710 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g38980.2 |
| Rice Genome Annotation | LOC_Os09g38980.2 |
| Ricechip | LOC_Os09g38980.2 |
| KEGG | osa:9268167 dosa:Os09t0563300-02 |
| Entrez-Gene | 9268167 |