RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g39270.1 View Network Show in Genome Browser |
| Other Names | Os09g0566100 |
| Description | ZOS9-20 - C2H2 zinc finger protein, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 22566452-22572707 Nucleotide Length: 3210 |
| Protein-coding | LOC_Os09g39270 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os07g46180 LOC_Os03g24339 LOC_Os04g54420 LOC_Os02g08360 LOC_Os09g38620 LOC_Os03g22350 LOC_Os05g41750 LOC_Os04g28420 LOC_Os02g39890 LOC_Os03g21990 LOC_Os03g16920 More.. |
| Downstream Genes | LOC_Os10g35250 LOC_Os12g22630 LOC_Os10g41960 LOC_Os10g37630 LOC_Os10g28020 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g39270.1 |
| Rice Genome Annotation | LOC_Os09g39270.1 |
| Ricechip | LOC_Os09g39270.1 |
| KEGG | osa:4347878 dosa:Os09t0566100-01 |
| Entrez-Gene | 4347878 |