RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g39400.1 View Network Show in Genome Browser |
| Other Names | Os09g0567400 |
| Description | histidine-containing phosphotransfer protein, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 22653849-22657046 Nucleotide Length: 450 |
| Protein-coding | LOC_Os09g39400 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016049 | cell growth | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0004871 | signal transducer activity | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g08440 LOC_Os03g49500 LOC_Os03g12350 LOC_Os02g55320 LOC_Os04g58470 LOC_Os01g24430 LOC_Os07g43730 |
| Downstream Genes | LOC_Os12g04500 LOC_Os11g04720 LOC_Os11g38900 LOC_Os12g07450 |
| Reference | |
|---|---|
| PubMed | 16919402 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g39400.1 |
| Rice Genome Annotation | LOC_Os09g39400.1 |
| Ricechip | LOC_Os09g39400.1 |
| KEGG | osa:4347886 dosa:Os09t0567400-01 |
| Entrez-Gene | 4347886 |