RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g39410.1 View Network Show in Genome Browser |
| Other Names | Os09g0567500 |
| Description | male sterility protein, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 22660725-22665418 Nucleotide Length: 1518 |
| Protein-coding | LOC_Os09g39410 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0007049 | cell cycle | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0019748 | secondary metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g04820 LOC_Os08g37300 LOC_Os01g47780 LOC_Os07g40890 LOC_Os03g46150 LOC_Os04g42620 LOC_Os08g24790 LOC_Os07g40910 LOC_Os03g45920 LOC_Os01g50010 LOC_Os01g63580 More.. |
| Downstream Genes | LOC_Os11g30560 LOC_Os11g10460 LOC_Os10g22590 LOC_Os10g40420 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g39410.1 |
| Rice Genome Annotation | LOC_Os09g39410.1 |
| Ricechip | LOC_Os09g39410.1 |
| KEGG | osa:4347887 dosa:Os09t0567500-01 |
| Entrez-Gene | 4347887 |