RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g39430.1 View Network Show in Genome Browser |
| Other Names | Os09g0567800 |
| Description | GDSL-like lipase/acylhydrolase, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 22671424-22675441 Nucleotide Length: 1149 |
| Protein-coding | LOC_Os09g39430 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os08g32160 LOC_Os01g71474 LOC_Os04g40730 LOC_Os03g03164 LOC_Os02g43280 LOC_Os03g12250 LOC_Os01g39830 LOC_Os04g58870 LOC_Os04g58860 |
| Downstream Genes | LOC_Os11g26190 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5075 osa-miR160e-3p |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g39430.1 |
| Rice Genome Annotation | LOC_Os09g39430.1 |
| Ricechip | LOC_Os09g39430.1 |
| KEGG | osa:4347890 dosa:Os09t0567800-00 |
| Entrez-Gene | 4347890 |