RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g39550.1 View Network Show in Genome Browser |
| Other Names | Os09g0568900 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 22703362-22705713 Nucleotide Length: 372 |
| Protein-coding | LOC_Os09g39550 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0005730 | nucleolus | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g41610 LOC_Os07g45090 LOC_Os05g28280 LOC_Os02g30180 LOC_Os01g42650 LOC_Os08g44460 LOC_Os03g18510 LOC_Os02g09140 LOC_Os04g34100 LOC_Os01g51154 LOC_Os07g44650 More.. |
| Downstream Genes | LOC_Os12g07220 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g39550.1 |
| Rice Genome Annotation | LOC_Os09g39550.1 |
| Ricechip | LOC_Os09g39550.1 |
| KEGG | osa:4347900 dosa:Os09t0568900-01 |
| Entrez-Gene | 4347900 |