RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g39560.1 View Network Show in Genome Browser |
| Other Names | Os09g0569100 |
| Description | genetic modifier, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 22707623-22709559 Nucleotide Length: 1152 |
| Protein-coding | LOC_Os09g39560 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g49380 LOC_Os02g19150 LOC_Os01g62070 LOC_Os03g31490 LOC_Os09g17620 LOC_Os03g41080 LOC_Os03g53300 LOC_Os03g10860 LOC_Os02g09750 LOC_Os09g04440 LOC_Os01g68330 More.. |
| Downstream Genes | LOC_Os12g01360 LOC_Os11g01330 LOC_Os12g19530 LOC_Os12g32970 LOC_Os10g34030 LOC_Os12g02350 |
| Pathways | |
|---|---|
| Metacyc Pathways | PWY-181 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g39560.1 |
| Rice Genome Annotation | LOC_Os09g39560.1 |
| Ricechip | LOC_Os09g39560.1 |
| KEGG | osa:4347902 dosa:Os09t0569100-01 |
| Entrez-Gene | 4347902 |